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 ====== Community news ====== ====== Community news ======
  
-  * Manon Helluy ​(IRSTEA UR RECOVERAix-en-Provence),​ Philippe Balandier (IRSTEA UR EFNO, Nogent-sur-Vernisson) and Nicolas Donès (INRA UMR PIAF, Clermont-Ferrand) came 5 days in AMAP to **add a water transfer package in the Regeneration library**. This package contains the **water transfer process in soil** previously implemented in **RReShar module** ​and the **water transfer in aerial plant of vegetation** has been added.+  * Seyed Mahdi Heshmatol Vaezin ​(University of TehranIran) came back one week to AMAP to **refine his Poplar model** sub compartments (site index, height, survival...) and meet Gilles Le Moguedec to prepare future studies about optimization. // fc-19.9.2020 //
  
-  * Francois Pimont (URFM, Avignon) spent 2 days in AMAP to work on a **general upgrade of the Fuel Manager**, with simpler starting options and a new 3D viewer. // fc-4.10.2019 // +  * Mathieu Jonard (UCL Louvain La Neuve, Belgium) teleworked 3 days to **review the nutrients atmospheric deposition and add dead wood management in Heterofor**. // fc-11.9.2020 // 
 + 
 +  * Guillaume Salzet, Julien Sainte-Marie and Thomas Aiguier (UMR Silva, Nancy) started the **integration of the Simcop_Qual wood quality model** in Capsis remotely. They have teleworked for a week and a half to get the initial Capsis training and starting stage, the project is now under progress with occasional remote meetings. // fc-1.10.2020 // 
 + 
 +  * Manon Helluy (INRAE UR RECOVER, Aix-en-Provence) teleworked on the **RReShar model** and the **Regeneraton library**: **growth of saplings and vegetation layers**, **survival of saplings**, **time-dependent LAI of trees**, creation of exports, correction of bugs, code refactoring and cleaning. An **UML classes diagram** has been created (tool: **Modelio**) describing the main classes and relationships involved in RReShar, the Regeneration and Samsaralight libraries and the Capsis kernel. Manon will integrate it in her **thesis manuscrit** to illustrate the functioning of RReShar. //​nb-17.08.2020//​ 
 + 
 +  * Benoît Courbaud (INRA UR LESSEM, Grenoble) teleworked on the **Samsara2 model**: improved the **functioning of a script** (better automatization,​ added events names in outputs), improved the **graphical user interface of a thinning tool**, took into account the **core zone** in some export tools. // nb-17.08.2020//​ 
 + 
 +  * Seyed Mahdi Heshmatol Vaezin (University of Tehran, Iran) spent two weeks in AMAP to integrate a french **poplar model** in Capsis. The model includes a product volume compartment. // fc-8.7.2020 // 
 + 
 +  * François Lefèvre (INRAE URFM, Avignon) teleworked on the **regeneration process of Luberon2 model**. // nb-19.06.2020//​ 
 + 
 +  * Mathieu Jonard (UCL Louvain La Neuve, Belgium) teleworked 2 days on **Heterofor water balance and nutrients processes**. // fc-18.6.2020 // 
 + 
 +  * Mathieu Buoro and Amaia Lamarins (INRAE Ecobiop, Saint Pée) teleworked 2 days on the **migration processes in the Ibasam model**. // fc-18.6.2020 // 
 + 
 +  * A work has been conducted to build **a parallel script to run a great number of Forceeps simulations** on several machines and clusters. Features have been added to Capsis to choose explicitly the memory management algorithm at start time. // fc-6.3.2020 // 
 + 
 +  * Several **cold cases were processed** during the 2020 containment period, including Capsis (plugged then unplugged) multi screens windows management, better groups handling in tools, better management of Capsis distributions with a single model, enhancements in the Capsis floating table and its plotting features... // fc-18-6-2020 // 
 + 
 +  * The **FOREM 2020 meeting in Orléans was canceled** due to the Covid-19 epidemic. // fc-17.3.2020 // 
 + 
 +  * Mathieu Jonard (UCL, Louvain la Neuve, Belgium) spent a week in Montpellier to work on **a monthly nutrient budget method in his Heterofor** model. // fc-6.3.2020 // 
 + 
 +  * Manon Helluy (IRSTEA UR RECOVER, Aix-en-Provence) came 2 days to AMAP to work on the **RReShar model**. The **leaf area density** of a tree is now **species and time dependent** and a **basal area index** has been added in **tree growth process**. // nb-21.2.2020 // 
 + 
 +  * Mathieu Buoro and Amaia Lamarins (INRAE Ecobiop, St Pée sur Nivelle) came 3 days in AMAP to work on the **infrastructure of the Ibasam model**. // fc-24.2.2020 // 
 + 
 +  * Manon Helluy (IRSTEA UR RECOVER, Aix-en-Provence) came 1 day to AMAP to work on the **water transfer in aerial part of vegetation** in the **Regeneration library**. // nb-21.2.2020 // 
 + 
 +  * Florian Delerue and Gloria Ola (Bordeaux INP Georessources et Environnement / INRA ISPA, Bordeaux) spent a week in AMAP to prepare **a sensitivity analysis on the Woudyfor model**. Variables were moved and dialogs were completed for a finer configuration,​ a script was built to run the needed simulations from R, exports and graphs were added to help evaluate the results. // fc-3.2.2020 // 
 + 
 +  * The **FOREM 2020 meeting will be held in Orléans next March 31 - April 2, 2020**, hosted by INRAE BioForA. FOREM (formerly CAQSIS) is a french speaking animation network of scientists involved in modelling forest and wood systems in their environment. The members of the Capsis project will meet too on this occasion. // fc-3.2.2020 // 
 + 
 +  * Benoit Courbaud (INRAE Grenoble) spent 3 days in AMAP to add **price lists and market values in Samsara2**. These values can be used in Samsara2'​s Multicriteria Thinning Tool. They were made compatible with the Economics2 library by Gauthier Ligot (ULG Gembloux, Belgium) with which Samsara2 is connected. // fc-24.1.2020 //  
 + 
 +  * INRA and IRSTEA have merged on 1 January 2020 to **a new research institute named [[https://​www.inrae.fr/​|INRAE]]**. // fc-20.1.2020 // 
 + 
 +  * A **Capsis training session** took place in AMAP last 15-16 January, 8 people attended this sessions. // fc-20.1.2020 // 
 + 
 +  * Maude Toïgo (CNRS-CEFE, Montpellier) came one day to AMAP to work on the creation of two **thinning tools** for the **Forceeps** model. nb-17.1.2020 
 + 
 +  * A **Luberon2 practice session** took place in a GenTree European project workshop, see [[transfer|the Transfer page]] (Francois ​Lefèvre, INRAE URFM Avignon, 16.12.2019) 
 + 
 +  * Nicolas Martin, Julien Ruffault and François Pimont (INRAE URFM Avignon) came 3 days in december and 2 days in January to work on the **introduction of the Sureau model by Hervé Cochard (INRAE Piaf Clermont-Ferrand) in Capsis. A prototype was built together.** See [[models|the project page]] for details. // fc-10.1.2020 // 
 + 
 +  * Christine Deleuze (ONF RDI, Dole) released **the capsis-ONF-2019 installer including 24 growth models** with the agreement of their respective authors and distributed it to the ONF R&D teams, see [[transfer|the Transfer page]] for details. // fc-10.1.2020 // 
 + 
 +  * Manon Helluy (IRSTEA UR RECOVER, Aix-en-Provence) came 1 day to AMAP to add a **water stress index in soil** and add a **new competition index**. // nb-6.12.2019 // 
 + 
 +  * Benoit Courbaud (IRSTEA Grenoble) came 3 days to AMAP to add **an ecological index based on micro dendro habitats** to the trees in Samsara2. // fc-3.12.2019 // 
 + 
 +  * Gilles Le Moguedec (INRA AMAP) spent **one week at UTAD in Vila Real, Portugal**, to work on the optimisation part of ModisPinaster with Teresa Fonseca and Adelaide Cerveira. // fc-4.11.2019 // 
 + 
 +  * Manon Helluy (IRSTEA UR RECOVER, Aix-en-Provence),​ Philippe Balandier (IRSTEA UR EFNO, Nogent-sur-Vernisson) and Nicolas Donès (INRA UMR PIAF, Clermont-Ferrand) came 5 days in AMAP to **add a water transfer package in the Regeneration library**. This package contains the **water transfer process in soil** previously implemented in **RReShar module** and the **water transfer in aerial plant of vegetation** has been added. // nb-21.10.2019 // 
 + 
 +  * François ​Pimont (URFM, Avignon) spent 2 days in AMAP to work on a **general upgrade of the Fuel Manager**, with simpler starting options and a new 3D viewer. // fc-4.10.2019 // 
  
   * Frédérique Santi (INRA BioforA, Orléans) spent 3 more days in AMAP to add **a ShapeFile (ESRI .shp) exporter to Ecoaf** and work on the pre existing trees dbh and height models. // fc-13.9.2019 //   * Frédérique Santi (INRA BioforA, Orléans) spent 3 more days in AMAP to add **a ShapeFile (ESRI .shp) exporter to Ecoaf** and work on the pre existing trees dbh and height models. // fc-13.9.2019 //
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   * Robert Schneider (UQAR Rimouski, Québec) came 3 days to AMAP to work on his **CEP model (formerly PlantaBSL): optional expansion of the plots to 1 hectare, several kinds of interventions**:​ elite trees, skid trails, gaps, see [[http://​capsis.cirad.fr/​capsis/​help_en/​plantabsl|the CEP documentation page]]. // fc-24.6.2019 //   * Robert Schneider (UQAR Rimouski, Québec) came 3 days to AMAP to work on his **CEP model (formerly PlantaBSL): optional expansion of the plots to 1 hectare, several kinds of interventions**:​ elite trees, skid trails, gaps, see [[http://​capsis.cirad.fr/​capsis/​help_en/​plantabsl|the CEP documentation page]]. // fc-24.6.2019 //
  
-  * Frédérique Santi And Julien Castellani (INRA BioforA, Orléans) spent 2 days in AMAP with a visit of Fabien Liagre (Agroof Anduze) to work on **Ecoaf: better shapefile import tool at initialization time**, graphs and exports. // fc-24.6.2019 //+  * Frédérique Santi and Julien Castellani (INRA BioforA, Orléans) spent 2 days in AMAP with a visit of Fabien Liagre (Agroof Anduze) to work on **Ecoaf: better shapefile import tool at initialization time**, graphs and exports. // fc-24.6.2019 //
  
   * Jacques Labonne, Dorinda Folio and Louise Chevalier (INRA Ecobiop, Saint Pée sur Nivelle) came 3 days in AMAP to **start the Ibasam project** and work on Runaway and Mediterranea. // fc-7.6.2019 //   * Jacques Labonne, Dorinda Folio and Louise Chevalier (INRA Ecobiop, Saint Pée sur Nivelle) came 3 days in AMAP to **start the Ibasam project** and work on Runaway and Mediterranea. // fc-7.6.2019 //
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   * Sylvie Muratorio (INRA URFM, Avignon) came 2 days to work on the **generalization of the Luberon2-Metatrom connection** (F. Lefèvre, Claire Godineau, INRA URFM, Leopoldo Sanchez, INRA AGPF, Orleans) to her PhysioDemoGenetics module. // fc-11.3.2019 //   * Sylvie Muratorio (INRA URFM, Avignon) came 2 days to work on the **generalization of the Luberon2-Metatrom connection** (F. Lefèvre, Claire Godineau, INRA URFM, Leopoldo Sanchez, INRA AGPF, Orleans) to her PhysioDemoGenetics module. // fc-11.3.2019 //
  
-  * Maude Toïgo (CNRS-CEFE, Montpellier) came one day to AMAP to work on the creation of a thinning tool for the **Forceeps ​model**. // nb-1.3.2019 //+  * Maude Toïgo (CNRS-CEFE, Montpellier) came one day to AMAP to work on the creation of a **thinning tool** for the **Forceeps** ​model. // nb-1.3.2019 //
  
   * Frédérique Santi (INRA BioforA, Orléans) came one week to AMAP to work on Ecoaf, which can now **read parcels in ESRI Shape File format exported from the Telepac application** (Ministère de l'​Agriculture et de l'​Alimentation) by Christophe Sotteau (AGRO-ECO Expert). // fc-25.2.2019 //   * Frédérique Santi (INRA BioforA, Orléans) came one week to AMAP to work on Ecoaf, which can now **read parcels in ESRI Shape File format exported from the Telepac application** (Ministère de l'​Agriculture et de l'​Alimentation) by Christophe Sotteau (AGRO-ECO Expert). // fc-25.2.2019 //
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   * Frédéric André (UCL ELI-e, Louvain, Belgium) came to AMAP for **a week to work on Heterofor**:​ maintenance respiration,​ fine resolution radiative balance and **SamsaraLight parallelisation** in Legacy and Tag mode. // fc-4.8.2017 //   * Frédéric André (UCL ELI-e, Louvain, Belgium) came to AMAP for **a week to work on Heterofor**:​ maintenance respiration,​ fine resolution radiative balance and **SamsaraLight parallelisation** in Legacy and Tag mode. // fc-4.8.2017 //
  
-  * Claire Godineau (INRA URFM) came 3 days in AMAP to create the **Luberon2** model in the context of the RMT-IGS project: "​Assessment of the genetic impacts of adaptation-oriented sylviculture practices"​. //​nb-27.07.2017//​+  * Claire Godineau (INRA URFM) came 3 days in AMAP to create the **Luberon2** model in the context of the RMT-IGS project: "​Assessment of the genetic impacts of adaptation-oriented sylviculture practices"​. //​nb-27.7.2017//​
  
   * Sylvie Muratorio (INRA URFM) came 2 days to add a **GeneticMemory system in the Genetics library** to enhance the compatibility of the library with the specific memory mode in the PhysioDemoGenetics module and more generally with the optional memorizers in Capsis. //​fc-24.5.2017//​   * Sylvie Muratorio (INRA URFM) came 2 days to add a **GeneticMemory system in the Genetics library** to enhance the compatibility of the library with the specific memory mode in the PhysioDemoGenetics module and more generally with the optional memorizers in Capsis. //​fc-24.5.2017//​
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   * The **CAQSIS 2017** meeting will take place in Bordeaux next 28-30 March, hosted by the [[http://​www.fcba.fr/​|FCBA]]. The schedule contains 24 contributions. //​fc-16.3.2017//​   * The **CAQSIS 2017** meeting will take place in Bordeaux next 28-30 March, hosted by the [[http://​www.fcba.fr/​|FCBA]]. The schedule contains 24 contributions. //​fc-16.3.2017//​
  
-  * Mathieu Jonard (UCL ELI-e, Louvain, Belgium) spent 1 week in AMAP to work on the **Heterofor** model : debugging, added a stand viewer, created exports. //​nb-10.03.2017//​+  * Mathieu Jonard (UCL ELI-e, Louvain, Belgium) spent 1 week in AMAP to work on the **Heterofor** model : debugging, added a stand viewer, created exports. //​nb-10.3.2017//​
  
-  * Benoît Courbaud (IRSTEA, Grenoble) spent 3 days to work on the **Samsara2** model : created new graphics. //​nb-10.03.2017//​+  * Benoît Courbaud (IRSTEA, Grenoble) spent 3 days to work on the **Samsara2** model : created new graphics. //​nb-10.3.2017//​
  
-  * Marion Jourdan (CNRS, UMR CEFE, Montpellier) spent 1 day in AMAP to create a **sensitivity analysis script** for the **Forceps** model. //​nb-20.02.2017// ​+  * Marion Jourdan (CNRS, UMR CEFE, Montpellier) spent 1 day in AMAP to create a **sensitivity analysis script** for the **Forceps** model. //​nb-20.2.2017// ​
  
-  * Sylvie Oddou Muratorio (INRA, UMR URFM, Avignon) spent 1 day in AMAP to **simplify** and **accelerate processes** in the **PhysioDemoGenetics** model. //​nb-17.02.2017//​+  * Sylvie Oddou Muratorio (INRA, UMR URFM, Avignon) spent 1 day in AMAP to **simplify** and **accelerate processes** in the **PhysioDemoGenetics** model. //​nb-17.2.2017//​
  
-  * Louis de Wergifosse (UCL, Belgium) spent 3 days in AMAP to add a **phenology module** in the **Heterofor** model. //​nb-25.01.2017//​+  * Louis de Wergifosse (UCL, Belgium) spent 3 days in AMAP to add a **phenology module** in the **Heterofor** model. //​nb-25.1.2017//​
  
   * A **Capsis training course** was organised by the INRA Avignon URFM research unit on 17-18 January, with 7 attendants. It was followed on 19-20 by training and working sessions for the connection of the **Heterofor** model by Mathieu Jonard (UCL, Belgium) with Hendrik Davi's **Castanea library**. Frédéric André and Louis de Wergifosse (UCL) attended these sessions. //​fc-23.1.2017//​   * A **Capsis training course** was organised by the INRA Avignon URFM research unit on 17-18 January, with 7 attendants. It was followed on 19-20 by training and working sessions for the connection of the **Heterofor** model by Mathieu Jonard (UCL, Belgium) with Hendrik Davi's **Castanea library**. Frédéric André and Louis de Wergifosse (UCL) attended these sessions. //​fc-23.1.2017//​
home.1571655311.txt · Last modified: 2019/10/21 10:55 by beudez